Jarrod Chapman

  • Program Years: 1999-2003
  • Academic Institution: University of California, Berkeley
  • Field of Study: Computational Biology
  • Academic Advisor: Daniel Rokhsar
  • Practicum(s):
    Stanford Synchrotron Research Laboratory (2000)
  • Degree(s):
    Ph.D. Physics - Designated Emphasis Computational and Genomic Biology, UC Berkeley 2004
    M.A. Physics, UC Berkeley, 1999
    B.S. Engineering Physics, UC Berkeley 1997

Current Status

  • Status: Postdoctoral Fellow, Computational Genomics Program DOE Joint Genome Institute
  • Research Area: Whole Genome Shotgun Assembly; Computational Genomics
  • Publications

    Community structure and metabolism through reconstruction of microbial genomes from the environment.
    Nature. 2004 Mar 4;428(6978):37-43.

    Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes
    Science, Vol. 297, No. 5585, 1301-1310, August 23, 2002

    The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins
    Science, Vol. 298, No. 5601, 2157-2167, December 13, 2002

    Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78.
    Nat Biotechnol. 2004 Jun;22(6):695-700.

    Isothermal Strand-Displacement Amplification Applications for High-Throughput Genomics
    Genomics, Vol. 80, No. 6, 691-698, December 2002